SCenic Viewer Video Tutorial Library
Short walkthroughs for every step of SCenic Viewer: launching the app, loading an RDS object, generating UMAP, violin, and feature plots, using the advanced features, and saving your session. Prefer written instructions? Read the text tutorials.
How to Access SCenic Viewer from Bridge Horizon
Launch SCenic Viewer from the Bridge Horizon dashboard.
How to Launch SCenic Viewer
Open the app from the Apps section of the dashboard.
How to Load Your RDS Object
Browse for and load a Seurat RDS object into SCenic Viewer.
How to Generate a UMAP
Visualize clusters with a UMAP plot, colored by cluster or annotation.
How to Generate a Violin Plot
Compare gene expression distributions across clusters and conditions.
How to Generate a Feature Plot
Map the expression of a gene of interest onto the UMAP.
How to Leverage SCenic Viewer's Advanced Features
Labels, colors, treatment splits, and other plot customizations.
How to Save Your Session
Save and revisit your SCenic Viewer session.
Keep exploring
Curious what a plot means once you've made it? Read the plot descriptions, or see the full Bridge Horizon video library for dashboard basics.